Single-molecule sequencing of an individual human genome
SRA009216
Dmitry Pushkarev1,2, Norma F Neff1,2 & Stephen R Quake1
Billions of 24- to 70-bp reads (32 bp average)
28 by one sequencing instrument by a single operator with four data collection runs. Single-molecule sequencing enabled analysis of human genomic information without the need for cloning, amplification or ligation. determined identified 752 regions of copy number variation by analyzing coverage depth alone and validated 27 of these using digital PCR.
90% of the National Center for Biotechnology Information (NCBI) reference genome.
average coverage
2.8 million single nucleotide polymorphisms (SNPs) with a false-positive rate of less than 1% as validated by Sanger sequencing and 99.8% concordance with SNP genotyping arrays.
Nature Biotechnology
http://www.nature.com/nbt/journal/vaop/ncurrent/abs/nbt.1561.html.
See also
Inflated claims for the $50,000 genome by Times Online 20090812.
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